Is our retina really upside down?



Congratulations Dr. John!

We are most delighted that John Bear has just passed his PhD viva!

For his thesis, John investigated spectral processing in zebrafish retinal ganglion cells.

Thank you to Ryan MacDonald and George Kemenes for serving as examiners, and Kevin Staras for chairing!


John’s PhD publication:

Zhou M*, Bear J*, Roberts PA, Janiak FK, Semmelhack J, Yoshimatsu T, Baden T§. Zebrafish Retinal Ganglion Cells Asymmetrically Encode Spectral and Temporal Information Across Visual Space. Current Biology 30, 2927-2942. (bioRxiv version). direct link. pdf.


Boehringer Ingelheim-FENS Research Award 2022

“The Federation of European Neuroscience Societies (FENS) and Boehringer Ingelheim are delighted to announce the recipients of the Boehringer Ingelheim FENS Research Award 2022: Prof. Tom Baden (UK) and Prof. Tatjana Tchumatchenko (DE).

FENS and Boehringer Ingelheim would like to congratulate both winners for their outstanding scientific achievements. The award will be presented during the FENS Forum on 9-13 July 2022 in Paris, France, where the two awardees will jointly give the Boehringer-Ingelheim / FENS Research Award lecture.”

Winners of the Boehringer Ingelheim FENS Research Award 2022 announced

Two new papers

Paper 1

For colour vision, retinal circuits must separate information about intensity and wavelength. This requires circuit level comparison of at least two spectrally distinct photoreceptors. However, many vertebrates use four or more, and in those cases the nature and implementation of this computation remains poorly understood. Here, we establish the complete circuit architecture and function of outer retinal circuits underlying colour processing in the tetrachromatic larval zebrafish. Our findings reveal that the specific spectral tunings of the four cone types near optimally rotate the encoding of natural daylight in a principal component analysis (PCA)−like manner to yield one primary achromatic axis, two colour opponent axes as well as a secondary UV-achromatic axis for prey capture. We note that fruit flies − the only other tetrachromat species where comparable circuit-level information is available − use essentially the same strategy to extract spectral information from their relatively blue-shifted terrestrial visual world. Together, our results suggest that rotating colour space into achromatic and chromatic axes at the eye′s first synapse may be a fundamental principle of colour vision when using more than two spectrally well separated photoreceptor types.

The central goal of this study was to try and infer the total effective cone-integration logic of bipolar cells in larval zebrafish by way of linking highly resolved spectral tuning functions across these two populations of neurons.

We previously showed that the four zebrafish cones exhibit distinct but highly stereoypical tunings at the level of their output (paper 1). Accordingly, we used the same recording conditions to also obtain spectral tuning functions of the downstream neurons, the retinal bipolar cells (right).

We find that this works very well, allowing us to explain ~95% of the variance in bipolar cell responses based on linear cone-combinations. Based on this, we chart an overview of the total cone-integration logic in larval zebrafish, and relate these insights to spectral processing in mammalians.